Using Python 3.5+ os.scandir() optimized variant.
Starting.
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*Collecting tree differences
comparing [C:/MY-STUFF/Code/mergeall/test/test1] [C:/MY-STUFF/Code/mergeall/test/test2]
excluding C:/MY-STUFF/Code/mergeall/test/test2\__bkp__
comparing [C:/MY-STUFF/Code/mergeall/test/test1\d3] [C:/MY-STUFF/Code/mergeall/test/test2\d3]
Phase runtime: 0.0004447265933307627
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*Reporting tree differences
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SAMEFILE DIFFERENCES: (name, dirfrom, dirto, why)
**These items will be replaced in dirto by automatic resolution**

[('.htaccess',
  'C:/MY-STUFF/Code/mergeall/test/test1\\d3',
  'C:/MY-STUFF/Code/mergeall/test/test2\\d3',
  'modtime'),
 ('f3.txt',
  'C:/MY-STUFF/Code/mergeall/test/test1\\d3',
  'C:/MY-STUFF/Code/mergeall/test/test2\\d3',
  'modtime'),
 ('f3.txt',
  'C:/MY-STUFF/Code/mergeall/test/test1',
  'C:/MY-STUFF/Code/mergeall/test/test2',
  'modtime'),
 ('f6.txt',
  'C:/MY-STUFF/Code/mergeall/test/test1',
  'C:/MY-STUFF/Code/mergeall/test/test2',
  'filesize')]
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UNIQUE ITEMS IN DIRTO: (names, dirfrom, dirto)
**These items will be deleted from dirto by automatic resolution**

[(['$RECYCLE.BIN', '.Trash-1000', 'd2', 'Desktop.ini', 'f2.txt'],
  'C:/MY-STUFF/Code/mergeall/test/test1',
  'C:/MY-STUFF/Code/mergeall/test/test2'),
 (['desktop.ini', 'f5.txt', 'Thumbs.db'],
  'C:/MY-STUFF/Code/mergeall/test/test1\\d3',
  'C:/MY-STUFF/Code/mergeall/test/test2\\d3')]
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UNIQUE ITEMS IN DIRFROM: (names, dirfrom, dirto)
**These items will be copied over to dirto by automatic resolution**

[(['.DS_Store', '._.TemporaryItems', 'd1', 'f1.txt'],
  'C:/MY-STUFF/Code/mergeall/test/test1',
  'C:/MY-STUFF/Code/mergeall/test/test2'),
 (['.DS_Store', '.fseventsd', '.Trashes', 'f4.txt'],
  'C:/MY-STUFF/Code/mergeall/test/test1\\d3',
  'C:/MY-STUFF/Code/mergeall/test/test2\\d3')]
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MIXED MODE NAMES: (name, dirfrom, dirto)
**These items will be replaced in dirto by automatic resolution**

[('m1',
  'C:/MY-STUFF/Code/mergeall/test/test1',
  'C:/MY-STUFF/Code/mergeall/test/test2'),
 ('m2',
  'C:/MY-STUFF/Code/mergeall/test/test1',
  'C:/MY-STUFF/Code/mergeall/test/test2')]
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*Resolving tree differences
....backing up all items to C:/MY-STUFF/Code/mergeall/test/test2\__bkp__\date161012-time182159
replaced same file, using FROM C:/MY-STUFF/Code/mergeall/test/test1\d3\.htaccess
replaced same file, using FROM C:/MY-STUFF/Code/mergeall/test/test1\d3\f3.txt
replaced same file, using FROM C:/MY-STUFF/Code/mergeall/test/test1\f3.txt
replaced same file, using FROM C:/MY-STUFF/Code/mergeall/test/test1\f6.txt
removed old TO dir, C:/MY-STUFF/Code/mergeall/test/test2\$RECYCLE.BIN
removed old TO dir, C:/MY-STUFF/Code/mergeall/test/test2\.Trash-1000
removed old TO dir, C:/MY-STUFF/Code/mergeall/test/test2\d2
removed old TO file, C:/MY-STUFF/Code/mergeall/test/test2\Desktop.ini
removed old TO file, C:/MY-STUFF/Code/mergeall/test/test2\f2.txt
removed old TO file, C:/MY-STUFF/Code/mergeall/test/test2\d3\desktop.ini
removed old TO file, C:/MY-STUFF/Code/mergeall/test/test2\d3\f5.txt
removed old TO file, C:/MY-STUFF/Code/mergeall/test/test2\d3\Thumbs.db
copied new FROM file, C:/MY-STUFF/Code/mergeall/test/test1\.DS_Store
copied new FROM file, C:/MY-STUFF/Code/mergeall/test/test1\._.TemporaryItems
copied new FROM dir, C:/MY-STUFF/Code/mergeall/test/test1\d1
copied new FROM file, C:/MY-STUFF/Code/mergeall/test/test1\f1.txt
copied new FROM file, C:/MY-STUFF/Code/mergeall/test/test1\d3\.DS_Store
copied new FROM dir, C:/MY-STUFF/Code/mergeall/test/test1\d3\.fseventsd
copied new FROM file, C:/MY-STUFF/Code/mergeall/test/test1\d3\.Trashes
copied new FROM file, C:/MY-STUFF/Code/mergeall/test/test1\d3\f4.txt
replaced dir with file, using FROM C:/MY-STUFF/Code/mergeall/test/test1\m1
replaced file with dir, using FROM C:/MY-STUFF/Code/mergeall/test/test1\m2
Phase runtime: 0.024587027374143595
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*Summary
Compared    => files: 6, folders: 2
Differences => samefile: 4, uniqueto: 8, uniquefrom: 8, mixedmode: 2
Changed:
files   => created: 6, deleted: 5, replaced: 5
folders => created: 2, deleted: 3, replaced: 1
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Finished.